Welcome back to The Velvet Runway and this feature about Hidden Gems in Japan That Most Tourists Miss.
Japan is a country that has captured the hearts of travelers from around the world. With its rich culture, stunning landscapes, and delicious cuisine, it’s no wonder that millions of tourists flock to Japan each year. However, many visitors tend to stick to the well-known destinations like Tokyo, Kyoto, and Osaka.
In this article, we’ll explore some of the hidden gems in Japan that most tourists miss, offering a unique and unforgettable experience for those willing to venture off the beaten path.
Hidden Gems in Japan That Most Tourists Miss
When most travelers think of Japan, Tokyo, Kyoto, and Osaka spring to mind. While these cities are undeniably spectacular, there’s a quieter, more intimate side of Japan that reveals itself in lesser-known destinations—places where you can stroll samurai districts without crowds, admire centuries-old temples, or soak in hot springs with locals.
If you’re searching for hidden gems in Japan that most tourists miss, here’s your guide to 10 underrated cities, cultural havens, and breathtaking landscapes worth adding to your itinerary. trip.
Hidden Gems in Japan That Most Tourists Miss
- Kanazawa: The Cultural Heart of Japan
- Matsumoto: A Castle Town with a Twist
- Nara: Where Deer Roam Free
- Takayama: A Step Back in Time
- Kamakura: A Seaside Retreat
- Nikko: A World Heritage Site
- Himeji: The White Heron Castle
- Kurashiki – Canals and Old Warehouses
- Shirakawa-go – Fairy-Tale Village
- Ise – Spiritual Heart of Japan

1. Kanazawa: The Cultural Heart of Japan
Kanazawa, located on the west coast of Japan, is a city that has managed to preserve its traditional charm while embracing modernity.

Kanazawa offers all the elegance of Kyoto without the heavy crowds. Known for its beautifully preserved samurai and geisha districts, the city is home to the stunning Kenrokuen Garden, one of the three most beautiful gardens in Japan. Wander through cobbled streets in Higashi Chaya, admire gold leaf crafts, and explore Kanazawa Castle’s serene grounds.
Visitors can also explore the Nagamachi Samurai District, where they can step back in time and experience the lifestyle of the samurai.
Pro Tip: Visit in spring or autumn when Kenroku-en bursts with cherry blossoms or fiery foliage—perfect for photographers.
2. Matsumoto: A Castle Town with a Twist
Matsumoto, situated in the Japanese Alps, is a picturesque town that boasts one of the oldest and most beautiful castles in Japan. The Matsumoto Castle, also known as the “Crow Castle” due to its black exterior, is a must-see for any visitor.
Beyond the castle, the city has a lively arts scene, quirky museums, and easy access to alpine trails. It’s a fantastic base for exploring the scenic Kamikochi Valley.

The town also offers a unique experience in the form of the Matsumoto City Museum of Art, which features a collection of works by the renowned artist Yayoi Kusama.
Pro Tip: Climb to the top of Matsumoto Castle’s tower for panoramic views of the Northern Alps—it’s one of the few castles in Japan where you can still walk original wooden staircases.
3. Nara: Where Deer Roam Free
Nara, located just south of Kyoto, is a city that is often overlooked by tourists. However, this ancient capital of Japan has a lot to offer, including the Todaiji Temple, which houses the world’s largest bronze statue of Buddha.

The city is also famous for its friendly deer, which roam freely in the Nara Park and are considered sacred messengers of the gods.
Pro Tip : Arrive early in the morning to enjoy Todai-ji’s giant Buddha without the tour groups and see Nara Park’s deer before the crowds arrive.
4. Takayama: A Step Back in Time
Takayama, nestled in the heart of the Japanese Alps, is a town that has managed to preserve its traditional architecture and way of life. Visitors can stroll through the narrow streets of the Old Town, lined with wooden houses and sake breweries.

The town is also famous for its biannual Takayama Festival, which features colorful floats and traditional performances.
Pro Tip: Stay overnight in a traditional ryokan with an onsen bath to experience Takayama at its most authentic.
5. Kamakura: A Seaside Retreat
Kamakura, located just an hour south of Tokyo, is a seaside town that offers a perfect escape from the hustle and bustle of the city. Visitors can explore the many temples and shrines scattered throughout the town, including the famous Great Buddha of Kamakura. The town also boasts beautiful beaches and hiking trails, making it an ideal destination for nature lovers

Pro Tip: Combine a temple visit with a short hike to enjoy ocean views—Kamakura offers both cultural depth and seaside relaxation.
6. Nikko: A World Heritage Site
Nikko, located north of Tokyo, is a town that is home to the Toshogu Shrine, a UNESCO World Heritage Site. The shrine is dedicated to Tokugawa Ieyasu, the founder of the Tokugawa shogunate, and is famous for its ornate architecture and intricate carvings.

Surrounded by forests and waterfalls, it’s a spiritual haven that feels worlds away from Tokyo, and visitors can also explore the stunning natural beauty of the area, including the Kegon Falls and Lake Chuzenji.
Pro Tip: Allow at least one night in Nikko to explore both the shrines and nearby nature spots—day trips often feel too rushed.
7. Himeji: The White Heron Castle
Himeji, located in the Kansai region, is home to the Himeji Castle, also known as the “White Heron Castle” due to its white exterior. The castle is considered one of the finest examples of Japanese castle architecture and has been designated as a national treasure.

Unlike many castles in Japan, Himeji has survived wars and earthquakes, making it a remarkable piece of living history. Visitors can also explore the beautiful gardens surrounding the castle and enjoy the cherry blossoms in the spring.
Pro Tip: Arrive when the gates open to beat the tour buses and experience the castle’s serene atmosphere.
8. Kurashiki – Canals and Old Warehouses
Kurashiki charms visitors with its Edo-era warehouses lining tranquil canals. Once a rice distribution hub, today those warehouses house art galleries, boutique shops, and cafés. The Ohara Museum of Art, Japan’s first museum of Western art, is a highlight.

Pro Tip: Visit the canal district at dusk when lanterns glow and the atmosphere becomes even more romantic.
9. Shirakawa-go – Fairy-Tale Village
A UNESCO World Heritage site, Shirakawa-go is famous for its gassho-zukuri farmhouses, with steep thatched roofs designed to withstand heavy snow. Visiting in winter is magical, as the snow transforms the village into a fairy-tale landscape, especially during the illumination events.

Pro Tip: Book ahead if visiting in winter—the illumination draws many visitors, and accommodation is limited in the village itself.
10. Ise – Spiritual Heart of Japan
Ise is home to the Ise Grand Shrine, Japan’s most sacred Shinto site, dedicated to the sun goddess Amaterasu. Nestled in a forest, the shrine embodies purity and simplicity. The nearby Okage Yokocho district recreates an Edo-era town with traditional shops and food stalls.

Pro Tip: Visit both the Inner and Outer Shrines—most tourists only see one, but together they reveal the full spiritual significance of Ise.
Final Thoughts on
Hidden Gems in Japan That Most Tourists Miss
In conclusion, while the popular destinations in Japan are certainly worth visiting, there are many hidden gems that offer a unique and authentic experience.
From the cultural heart of Kanazawa to the seaside retreat of Kamakura, these lesser-known destinations showcase the diverse beauty and rich history of Japan. So, the next time you plan a Japan tour, consider venturing off the beaten path and discovering these hidden gems for yourself.

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Such an inspiring list! I love discovering off-the-beaten-path spots — thanks for opening my wanderlust to hidden gems in Japan.
Japan is amazing! We spent 3 weeks there and it really wasn’t enough. I have lots more posts to write about Japan